By Laurie Burkitt 

BEIJING-- Alibaba Group Holding Ltd.'s public fight with the Chinese government over fakes is putting a spotlight on a little-known but increasingly aggressive regulatory agency that is seeking greater sway over the country's vast e-commerce market.

The State Administration for Industry and Commerce this week posted a white paper on its website that accused Alibaba of allowing the sales of counterfeit goods on its website, as well as tolerating bribery, the sale of illegal items like weapons and other violations. The Chinese e-commerce giant has publicly disputed the claims, in a rare move for a Chinese company.

The white paper and the agency's approach were "so unfair that we felt compelled to take the extraordinary step of preparing a formal complaint to the SAIC," Alibaba Executive Vice Chairman Joseph Tsai told analysts during a conference call on Thursday. In its other statements it accused an SAIC official who oversees e-commerce enforcement, Liu Hongliang, of "procedural misconduct."

On Thursday the SAIC removed the paper from its website, just one day after posting it, without stating a reason. SAIC officials didn't respond to requests for comment on Friday. Previously, it has said publicly it has an obligation to protect the marketplace.

Legal experts say they are watching to see how the SAIC or other authorities will react. Their next moves will "indicate the power of the agency to take retaliatory action against a privately owned company that challenges enforcement action," said Lester Ross, a Beijing-based attorney with U.S. law firm WilmerHale.

The SAIC's broadside against Alibaba was its most aggressive move yet against a major company. It comes as observers say the agency is trying to increase its profile and protect its turf against other Chinese agencies. The SAIC is increasingly flexing its muscles in Chinese e-commerce, a more than $500 billion market by KPMG's estimate, following complaints by businesses of the alleged availability of widespread fakes.

"They realized that international online trade is growing and it's going to hit a critical mass," said Joe Simone, director of Hong-Kong based intellectual property consulting firm SIPS.

The agency oversees a broad array of matters involving market order in China. That includes certain business licenses as well as trademark administration. It also keeps voluminous records on businesses in China, though it makes only partial data available outside of official and legal circles.

Last year it raided Microsoft Corp. offices in China as part of its investigation into how it sells and bundles it software. Microsoft has said it is cooperating. The SAIC also has probed the offices of foreign drug makers, though it never publicly levied any punishments.

The SAIC began working on its Alibaba white paper last year, after China's State Council, the government's highest decision-making body, gathered about 30 representatives from foreign and domestic companies to ask them about doing business online in China, Mr. Simone said.

Mr. Simone, who attended along with representatives of other companies, said some told officials that they weren't doing enough to tackle fakes. Companies recommended that the SAIC police the biggest offenders, he said. Mr. Simone said he told officials, "we have an elephant in the room, and I'm going to name them: Ali."

An Alibaba spokesman said it has an aggressive antifake effort that removed more than 90 million counterfeit items from its platforms over the past two years.

Experts say that much of the SAIC's recent moves have been attempts to assert its power and justify its existence. Leaders have stripped some of its powers away in recent years, including food safety oversight. It has waged turf wars with China's National Development and Reform Commission, the country's economic planner, over antimonopoly law enforcement, according to attorneys. Last year, the Ministry of Commerce and the NDRC spearheaded probes of prominent auto makers like Audi, BMW, and Mercedes-Benz parent Daimler while SAIC officials played only supporting roles.

The SAIC didn't respond to requests for comment and hasn't publicly spoken on its relationship with other government agencies.

For years, the SAIC lacked a legal foundation it needed, but recent changes in the consumer protection and trademark laws have helped that.

"That said, there is a learning curve that is anticipated as the SAIC tackles the task of implementing and enforcing the new laws," said James Zimmerman, chairman of the American Chamber of Commerce for China.

Legal and industry experts say that the SAIC tends to be fairly open with businesses, meeting regularly with corporate heads to discuss problems and proposed action plans. In December, SAIC chief Zhang Mao spoke at a reception held by the American Chamber of Commerce for China, which U.S. Ambassador to China Max Baucus also attended. "The huge market of China and the capabilities and advantages of the Unites States in terms of human resources and technology are bonding us closer together," Mr. Zhang said. "Harmonious cooperation will benefit both sides."

Mr. Zhang said in an interview with China's state-owned broadcaster China Central Television that SAIC posted on its website earlier this month that the agency would be pushing for better service and consumer protection online, where he says he also shops. The SAIC accepted 50,000 consumer disputes for online problems in the first 11 months of last year, Mr. Zhang said in the interview.

"Originally it was all young people, but now middle-aged and older people have entered e-commerce," he said, adding that "problems are not few" for the sector.

Yang Jie contributed to this article.

Write to Laurie Burkitt at laurie.burkitt@wsj.com

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